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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SOCS3 HGNC:19391 (HGNC)
9021 (Entrez Gene)
604176 (OMIM)
SOCS3 (Alliance of Genome Resources)
Chr17 q25.3 Chr17:78356778-78360925 (-)
GRCh38
O14543 (UniProt | EBI)
NM_001378932 (RefSeq)
mouse Socs3 MGI:1201791 (MGI)
12702 (Entrez Gene)
Gene Tree
Socs3 (Alliance of Genome Resources)
Chr11 82.96 cM Chr11:117856905-117860192 (-)
GRCm39
12702 (NCBI Gene Model)
O35718 (UniProt | EBI)
NM_007707 (RefSeq)
rat Socs3 RGD:621087 (Rat Genome Database)
89829 (Entrez Gene)
Socs3 (Alliance of Genome Resources)
Chr10 q32.2 O88583 (UniProt | EBI)
NM_053565 (RefSeq)
zebrafish socs3a ZDB-GENE-030131-7349 (Zebrafish Model Organism Database)
335409 (Entrez Gene)
socs3a (Alliance of Genome Resources)
Chr3 NP_956244 (RefSeq)
NM_199950 (RefSeq)
socs3b ZDB-GENE-040426-2528 (Zebrafish Model Organism Database)
406596 (Entrez Gene)
socs3b (Alliance of Genome Resources)
Chr12 NP_998469 (RefSeq)
NM_213304 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/30/2024
MGI 6.23
The Jackson Laboratory