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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GDNF HGNC:4232 (HGNC)
2668 (Entrez Gene)
600837 (OMIM)
GDNF (Alliance of Genome Resources)
Chr5 p13.2 Chr5:37812677-37840041 (-)
GRCh38
epilepsy
Hirschsprung's disease
Parkinsonism
P39905 (UniProt | EBI)
NM_001278098 (RefSeq)
mouse Gdnf MGI:107430 (MGI)
14573 (Entrez Gene)
Gene Tree
Gdnf (Alliance of Genome Resources)
Chr15 3.8 cM Chr15:7840327-7867056 (+)
GRCm39
Hirschsprung's disease
ENSMUSG00000022144 (Ensembl Gene Model)
ENSMUSP00000022744 (Ensembl)
ENSMUST00000022744 (Ensembl)
rat Gdnf RGD:2677 (Rat Genome Database)
25453 (Entrez Gene)
Gdnf (Alliance of Genome Resources)
Chr2 q16 Q07731 (UniProt | EBI)
NM_019139 (RefSeq)
zebrafish gdnfa ZDB-GENE-010226-1 (Zebrafish Model Organism Database)
79379 (Entrez Gene)
gdnfa (Alliance of Genome Resources)
Chr10 Q98TU0 (UniProt | EBI)
NM_131732 (RefSeq)
gdnfb ZDB-GENE-110609-2 (Zebrafish Model Organism Database)
101885082 (Entrez Gene)
gdnfb (Alliance of Genome Resources)
Chr5 XP_009299466 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory