ATRX Vertebrate HGNC

Vertebrate Homology

Source

Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	ATRX	HGNC:886 (HGNC) 546 (Entrez Gene) 300032 (OMIM) ATRX (Alliance of Genome Resources)	ChrX q21.1	ChrX:77504880-77786233 (-) GRCh38	alpha-thalassemia myelodysplasia syndrome alpha thalassemia-X-linked intellectual disability syndrome high grade glioma lung small cell carcinoma X-linked mental retardation-hypotonic facies syndrome-1	P46100 (UniProt \| EBI) NM_000489 (RefSeq)
mouse	Atrx	MGI:103067 (MGI) 22589 (Entrez Gene) Gene Tree Atrx (Alliance of Genome Resources)	ChrX 47.26 cM	ChrX:104841221-104972978 (-) GRCm39	alpha thalassemia-X-linked intellectual disability syndrome	22589 (NCBI Gene Model) Q61687 (UniProt \| EBI) NM_009530 (RefSeq)
rat	Atrx	RGD:619795 (Rat Genome Database) 246284 (Entrez Gene) Atrx (Alliance of Genome Resources)	ChrX q22			P70486 (UniProt \| EBI) NM_001105757 (RefSeq)
zebrafish	atrx	ZDB-GENE-030912-11 (Zebrafish Model Organism Database) 323299 (Entrez Gene) atrx (Alliance of Genome Resources)	Chr14			NP_956947 (RefSeq) NM_200653 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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