VCAN Vertebrate HGNC

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Vertebrate Homology

Source

Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/23/2024 MGI 6.23

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	VCAN	HGNC:2464 (HGNC) 1462 (Entrez Gene) 118661 (OMIM) VCAN (Alliance of Genome Resources)	Chr5 q14.2-q14.3	Chr5:83471618-83582303 (+) GRCh38	intracranial aneurysm	P13611 (UniProt \| EBI) NM_001126336 (RefSeq)
mouse	Vcan	MGI:102889 (MGI) 13003 (Entrez Gene) Gene Tree Vcan (Alliance of Genome Resources)	Chr13 45.5 cM	Chr13:89803431-89890628 (-) GRCm39		ENSMUSG00000021614 (Ensembl Gene Model) ENSMUSP00000105173 (Ensembl) ENSMUST00000109546 (Ensembl)
rat	Vcan	RGD:619940 (Rat Genome Database) 114122 (Entrez Gene) Vcan (Alliance of Genome Resources)	Chr2 q12			Q9ERB4 (UniProt \| EBI) NM_053663 (RefSeq)
zebrafish	vcana	ZDB-GENE-011023-1 (Zebrafish Model Organism Database) 116993 (Entrez Gene) vcana (Alliance of Genome Resources)	Chr5			NP_001313486 (RefSeq) NM_001326557 (RefSeq)
zebrafish	vcanb	ZDB-GENE-030131-2185 (Zebrafish Model Organism Database) 323465 (Entrez Gene) vcanb (Alliance of Genome Resources)	Chr10			NP_999853 (RefSeq) NM_214688 (RefSeq)