About   Help   FAQ
Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
25183

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human CD109 HGNC:21685 (HGNC)
135228 (Entrez Gene)
608859 (OMIM)
Chr6 q13 Chr6:73695785-73828317 (+)
GRCh38
Q6YHK3 (UniProt | EBI)
NM_133493 (RefSeq)
mouse Cd109 MGI:2445221 (MGI)
235505 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 43.65 cM Chr9:78615546-78716253 (+)
GRCm38
OTTMUSG00000036023 (VEGA)
OTTMUSP00000051097 (VEGA)
OTTMUST00000092445 (VEGA)
rat Cd109 363104 (Entrez Gene)
Chr8 q31 XP_003750594 (RefSeq)
NM_001108771 (RefSeq)
chimpanzee CD109 462825 (Entrez Gene)
Chr6 XP_518588 (RefSeq)
rhesus macaque CD109 716136 (Entrez Gene)
Chr4 XP_001112898 (RefSeq)
cattle CD109 534043 (Entrez Gene)
Chr9 XP_613667 (RefSeq)
dog CD109 474970 (Entrez Gene)
Chr12 XP_532205 (RefSeq)
chicken CD109 421862 (Entrez Gene)
Chr3 XP_419879 (RefSeq)
zebrafish cd109 569058 (Entrez Gene)
Chr20 XP_697512 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
04/08/2014
MGI 5.17
The Jackson Laboratory