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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
77224

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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mouse Clca4 MGI:2181989 (MGI)
229927 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 69.14 cM Chr3:144822623-144849357 (-)
GRCm38
OTTMUSG00000030497 (VEGA)
OTTMUSP00000039602 (VEGA)
OTTMUST00000075517 (VEGA)
rat Clca4l 499721 (Entrez Gene)
Chr2 q44 NP_001070824 (RefSeq)
NM_001077356 (RefSeq)
rhesus macaque LOC715292 715292 (Entrez Gene)
Chr1 XP_001105446 (RefSeq)
cattle CLCA3 281694 (Entrez Gene)
Chr3 NP_851361 (RefSeq)
NM_181018 (RefSeq)
LOC784768 784768 (Entrez Gene)
Chr3 P54281 (UniProt | EBI)
NM_001242583 (RefSeq)
dog LOC479964 479964 (Entrez Gene)
Chr6 XP_005622181 (RefSeq)
chicken LOC424523 424523 (Entrez Gene)
Chr8 XP_422360 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory