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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
9516

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRKD2 HGNC:17293 (HGNC)
25865 (Entrez Gene)
607074 (OMIM)
Chr19 q13.3 Chr19:46674316-46717127 (-)
GRCh38
Q9BZL6 (UniProt | EBI)
NM_016457 (RefSeq)
mouse Prkd2 MGI:2141917 (MGI)
101540 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 9.15 cM Chr7:16842902-16870461 (+)
GRCm38
101540 (NCBI Gene Model)
Q8BZ03 (UniProt | EBI)
NM_178900 (RefSeq)
rat Prkd2 292658 (Entrez Gene)
Chr1 q21 Q5XIS9 (UniProt | EBI)
NM_001013895 (RefSeq)
chimpanzee PRKD2 468929 (Entrez Gene)
Chr19 XP_524314 (RefSeq)
cattle PRKD2 782793 (Entrez Gene)
Chr18 XP_001251452 (RefSeq)
dog PRKD2 484427 (Entrez Gene)
Chr1 XP_005616468 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory