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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
56927

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CHST6 HGNC:6938 (HGNC)
4166 (Entrez Gene)
605294 (OMIM)
Chr16 q22 Chr16:75473124-75495028 (-)
GRCh38
Macular Dystrophy, Corneal, 1; MCDC1
Q9GZX3 (UniProt | EBI)
NM_021615 (RefSeq)
mouse Chst5 MGI:1931825 (MGI)
56773 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 58.11 cM Chr8:111889135-111910199 (-)
GRCm38
56773 (NCBI Gene Model)
Q9QUP4 (UniProt | EBI)
NM_019950 (RefSeq)
rat Chst5 307859 (Entrez Gene)
Chr19 q12 NP_001100901 (RefSeq)
NM_001107431 (RefSeq)
chimpanzee CHST6 736759 (Entrez Gene)
Chr16 XP_001141466 (RefSeq)
rhesus macaque CHST6 711570 (Entrez Gene)
Chr20 XP_001110474 (RefSeq)
cattle CHST6 538464 (Entrez Gene)
Chr18 NP_001178951 (RefSeq)
NM_001192022 (RefSeq)
dog CHST6 489707 (Entrez Gene)
Chr5 XP_005620742 (RefSeq)
chicken CHST6 770257 (Entrez Gene)
Chr11 NP_001269451 (RefSeq)
NM_001282522 (RefSeq)
western clawed frog chst6 100495636 (Entrez Gene)
ChrUN XP_004913665 (RefSeq)
zebrafish zgc:194879 100170782 (Entrez Gene)
Chr25 NP_001124093 (RefSeq)
NM_001130621 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory