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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
68490

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human STAM2 HGNC:11358 (HGNC)
10254 (Entrez Gene)
606244 (OMIM)
STAM2 (MyGene.info)
HGNC homology
Chr2 q23.3 Chr2:152116801-152175992 (-)
GRCh38.p7
O75886 (UniProt | EBI)
NM_005843 (RefSeq)
mouse Stam2 MGI:1929100 (MGI)
56324 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr2 30.41 cM Chr2:52692206-52742149 (-)
GRCm38
56324 (NCBI Gene Model)
O88811 (UniProt | EBI)
NM_019667 (RefSeq)
rat Stam2 311030 (Entrez Gene)
Chr3 q12 Q5XHY7 (UniProt | EBI)
NM_001012085 (RefSeq)
chimpanzee STAM2 459661 (Entrez Gene)
Chr2B NP_001267210 (RefSeq)
NM_001280281 (RefSeq)
cattle STAM2 538505 (Entrez Gene)
Chr2 NP_001069574 (RefSeq)
NM_001076106 (RefSeq)
dog STAM2 476150 (Entrez Gene)
Chr19 XP_013977000 (RefSeq)
chicken STAM2 424317 (Entrez Gene)
Chr7 O93436 (UniProt | EBI)
NM_001012922 (RefSeq)
frog, western clawed stam2 100490315 (Entrez Gene)
Chr9 XP_002936702 (RefSeq)
macaque, rhesus STAM2 695286 (Entrez Gene)
Chr12 XP_014965608 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
03/24/2020
MGI 6.15
The Jackson Laboratory