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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CHST12 HGNC:17423 (HGNC)
55501 (Entrez Gene)
610129 (OMIM)
CHST12 (Alliance of Genome Resources)
Chr7 p22.3 Chr7:2403448-2448484 (+)
GRCh38
Q9NRB3 (UniProt | EBI)
NM_001243795 (RefSeq)
mouse Chst12 MGI:1929064 (MGI)
59031 (Entrez Gene)
Gene Tree
Chst12 (Alliance of Genome Resources)
Chr5 79.04 cM Chr5:140491360-140510993 (+)
GRCm39
59031 (NCBI Gene Model)
Q99LL3 (UniProt | EBI)
NM_001425715 (RefSeq)
rat Chst12 RGD:1308214 (Rat Genome Database)
304322 (Entrez Gene)
Chst12 (Alliance of Genome Resources)
Chr12 q11 NP_001032864 (RefSeq)
NM_001037775 (RefSeq)
zebrafish chst12a ZDB-GENE-081022-13 (Zebrafish Model Organism Database)
407076 (Entrez Gene)
chst12a (Alliance of Genome Resources)
Chr3 NP_998712 (RefSeq)
NM_213547 (RefSeq)
chst12b.1 ZDB-GENE-090312-144 (Zebrafish Model Organism Database)
797290 (Entrez Gene)
chst12b.1 (Alliance of Genome Resources)
Chr1 XP_009304794 (RefSeq)
chst12b.2 ZDB-GENE-090312-212 (Zebrafish Model Organism Database)
797641 (Entrez Gene)
chst12b.2 (Alliance of Genome Resources)
Chr1 XP_017212411 (RefSeq)
chst12b.3 ZDB-GENE-090312-216 (Zebrafish Model Organism Database)
797576 (Entrez Gene)
chst12b.3 (Alliance of Genome Resources)
Chr1 XP_001338050 (RefSeq)
chst12b.4 ZDB-GENE-090312-166 (Zebrafish Model Organism Database)
797712 (Entrez Gene)
chst12b.4 (Alliance of Genome Resources)
Chr1 XP_001338178 (RefSeq)
chst12b.5 ZDB-GENE-090312-165 (Zebrafish Model Organism Database)
100538167 (Entrez Gene)
chst12b.5 (Alliance of Genome Resources)
Chr1 XP_003197678 (RefSeq)
chst12b.6 ZDB-GENE-090312-214 (Zebrafish Model Organism Database)
798013 (Entrez Gene)
chst12b.6 (Alliance of Genome Resources)
Chr1 XP_001338467 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory