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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
2001

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PLIN1 HGNC:9076 (HGNC)
5346 (Entrez Gene)
170290 (OMIM)
Chr15 q26 Chr15:89664367-89679417 (-)
GRCh38
Lipodystrophy, Familial Partial, Type 4; FPLD4
O60240 (UniProt | EBI)
NM_002666 (RefSeq)
mouse Plin1 MGI:1890505 (MGI)
103968 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 45.11 cM Chr7:79721164-79732776 (-)
GRCm38
103968 (NCBI Gene Model)
Q8CGN5 (UniProt | EBI)
NM_175640 (RefSeq)
rat Plin1 25629 (Entrez Gene)
Chr1 q31 P43884 (UniProt | EBI)
NM_013094 (RefSeq)
chimpanzee PLIN1 467755 (Entrez Gene)
Chr15 XP_001167226 (RefSeq)
rhesus macaque LOC706465 706465 (Entrez Gene)
Chr7 XP_001094838 (RefSeq)
cattle PLIN1 520598 (Entrez Gene)
Chr21 NP_001077168 (RefSeq)
NM_001083699 (RefSeq)
dog PLIN1 100856637 (Entrez Gene)
Chr3 XP_005618412 (RefSeq)
chicken PLIN1 415487 (Entrez Gene)
Chr10 NP_001120911 (RefSeq)
NM_001127439 (RefSeq)
zebrafish plin1 100034463 (Entrez Gene)
Chr18 XP_003200505 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/15/2014
MGI 5.17
The Jackson Laboratory