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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
56920

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SPATA5 HGNC:18119 (HGNC)
166378 (Entrez Gene)
613940 (OMIM)
Chr4 q28.1 Chr4:122923070-123319450 (+)
GRCh38
Q8NB90 (UniProt | EBI)
NM_145207 (RefSeq)
mouse Spata5 MGI:1927170 (MGI)
57815 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 18.46 cM Chr3:37419896-37579096 (+)
GRCm38
OTTMUSG00000007434 (VEGA)
OTTMUSP00000007939 (VEGA)
OTTMUST00000017179 (VEGA)
rat Spata5 361935 (Entrez Gene)
Chr2 q25 NP_001102019 (RefSeq)
NM_001108549 (RefSeq)
chimpanzee SPATA5 461474 (Entrez Gene)
Chr4 XP_517427 (RefSeq)
rhesus macaque SPATA5 708640 (Entrez Gene)
Chr5 XP_001104047 (RefSeq)
cattle SPATA5 100297992 (Entrez Gene)
Chr17 XP_002694445 (RefSeq)
dog SPATA5 483840 (Entrez Gene)
Chr19 XP_540960 (RefSeq)
chicken SPATA5 422665 (Entrez Gene)
Chr4 XP_420619 (RefSeq)
western clawed frog spata5 100494828 (Entrez Gene)
ChrUN XP_002941102 (RefSeq)
zebrafish spata5 100332622 (Entrez Gene)
Chr14 XP_002663242 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory