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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20658

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC7A1 HGNC:11057 (HGNC)
6541 (Entrez Gene)
104615 (OMIM)
Chr13 q12.3 Chr13:29509414-29595688 (-)
GRCh38
P30825 (UniProt | EBI)
NM_003045 (RefSeq)
mouse Slc7a1 MGI:88117 (MGI)
11987 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 88.48 cM Chr5:148327410-148399904 (-)
GRCm38
OTTMUSG00000025707 (VEGA)
OTTMUSP00000031291 (VEGA)
OTTMUST00000063315 (VEGA)
rat Slc7a1 25648 (Entrez Gene)
Chr12 p11 P30823 (UniProt | EBI)
NM_013111 (RefSeq)
chimpanzee SLC7A1 452516 (Entrez Gene)
Chr13 XP_009425077 (RefSeq)
rhesus macaque SLC7A1 712410 (Entrez Gene)
Chr17 NP_001253544 (RefSeq)
NM_001266615 (RefSeq)
cattle SLC7A1 539465 (Entrez Gene)
Chr12 NP_001129264 (RefSeq)
NM_001135792 (RefSeq)
dog SLC7A1 486022 (Entrez Gene)
Chr25 NP_001274482 (RefSeq)
NM_001287553 (RefSeq)
chicken SLC7A1 418922 (Entrez Gene)
Chr1 NP_001138962 (RefSeq)
NM_001145490 (RefSeq)
western clawed frog slc7a1 100492323 (Entrez Gene)
ChrUN XP_002934074 (RefSeq)
zebrafish slc7a1 559627 (Entrez Gene)
Chr10 XP_683623 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory