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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SEMA3D HGNC:10726 (HGNC)
223117 (Entrez Gene)
609907 (OMIM)
HGNC homology
Chr7 q21.11 Chr7:84995192-85186855 (-)
O95025 (UniProt | EBI)
NM_152754 (RefSeq)
mouse Sema3d MGI:1860118 (MGI)
108151 (Entrez Gene)
Gene Tree
HGNC homology
Chr5 3.97 cM Chr5:12383385-12588948 (+)
OTTMUSG00000054617 (VEGA)
OTTMUSP00000071658 (VEGA)
OTTMUST00000135405 (VEGA)
rat Sema3d 246262 (Entrez Gene)
Chr4 q12 NP_001098103 (RefSeq)
NM_001104633 (RefSeq)
chimpanzee SEMA3D 472431 (Entrez Gene)
Chr7 XP_009451750 (RefSeq)
rhesus macaque SEMA3D 707146 (Entrez Gene)
Chr3 XP_001107897 (RefSeq)
cattle SEMA3D 536417 (Entrez Gene)
Chr4 NP_001193025 (RefSeq)
NM_001206096 (RefSeq)
dog SEMA3D 475929 (Entrez Gene)
Chr18 XP_533138 (RefSeq)
chicken SEMA3D 396332 (Entrez Gene)
Chr1 Q90663 (UniProt | EBI)
NM_205373 (RefSeq)
western clawed frog sema3d 100492784 (Entrez Gene)
ChrUN XP_002935293 (RefSeq)
zebrafish sema3d 30250 (Entrez Gene)
Chr18 Q9W6G6 (UniProt | EBI)
NM_131048 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.01
The Jackson Laboratory