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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
22812

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PKD2L2 HGNC:9012 (HGNC)
27039 (Entrez Gene)
604669 (OMIM)
Chr5 q31 Chr5:137889436-137940467 (+)
GRCh38
Q9NZM6 (UniProt | EBI)
NM_014386 (RefSeq)
mouse Pkd2l2 MGI:1858231 (MGI)
53871 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 18.62 cM Chr18:34409423-34442789 (+)
GRCm38
53871 (NCBI Gene Model)
Q9JLG4 (UniProt | EBI)
NM_016927 (RefSeq)
rat Pkd2l2 291683 (Entrez Gene)
Chr18 p12 NP_001099626 (RefSeq)
NM_001106156 (RefSeq)
chimpanzee PKD2L2 745945 (Entrez Gene)
Chr5 XP_001170169 (RefSeq)
rhesus macaque PKD2L2 713629 (Entrez Gene)
Chr6 XP_001112415 (RefSeq)
cattle PKD2L2 521683 (Entrez Gene)
Chr7 NP_001033641 (RefSeq)
NM_001038552 (RefSeq)
dog PKD2L2 100855705 (Entrez Gene)
Chr11 XP_003639424 (RefSeq)
chicken PKD2L2 416298 (Entrez Gene)
Chr13 XP_414617 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory