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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
22946

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PKD2L1 HGNC:9011 (HGNC)
9033 (Entrez Gene)
604532 (OMIM)
Chr10 q24 Chr10:100288146-100330486 (-)
GRCh38
Q9P0L9 (UniProt | EBI)
NM_016112 (RefSeq)
mouse Pkd2l1 MGI:1352448 (MGI)
329064 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 36.91 cM Chr19:44147637-44192442 (-)
GRCm38
OTTMUSG00000033257 (VEGA)
OTTMUSP00000044798 (VEGA)
OTTMUST00000083379 (VEGA)
rat Pkd2l1 293937 (Entrez Gene)
Chr1 q54 NP_001099822 (RefSeq)
NM_001106352 (RefSeq)
chimpanzee PKD2L1 466255 (Entrez Gene)
Chr10 XP_001168415 (RefSeq)
rhesus macaque PKD2L1 710056 (Entrez Gene)
Chr9 XP_001107776 (RefSeq)
cattle PKD2L1 521231 (Entrez Gene)
Chr26 XP_002698535 (RefSeq)
dog PKD2L1 486838 (Entrez Gene)
Chr28 XP_005637930 (RefSeq)
chicken PKD2L1 428954 (Entrez Gene)
Chr6 XP_426509 (RefSeq)
western clawed frog pkd2l1 100495064 (Entrez Gene)
ChrUN XP_002936910 (RefSeq)
zebrafish pkd2l1 567026 (Entrez Gene)
Chr13 XP_695404 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory