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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
8247

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SEMA3E HGNC:10727 (HGNC)
9723 (Entrez Gene)
608166 (OMIM)
Chr7 q21.11 Chr7:83363906-83649163 (-)
GRCh38
CHARGE Syndrome
O15041 (UniProt | EBI)
NM_012431 (RefSeq)
mouse Sema3e MGI:1340034 (MGI)
20349 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 5.66 cM Chr5:14025276-14256689 (+)
GRCm38
OTTMUSG00000029684 (VEGA)
OTTMUSP00000038158 (VEGA)
OTTMUST00000073649 (VEGA)
rat Sema3e 296789 (Entrez Gene)
Chr4 q12 NP_001100049 (RefSeq)
NM_001106579 (RefSeq)
chimpanzee SEMA3E 472429 (Entrez Gene)
Chr7 XP_527803 (RefSeq)
rhesus macaque SEMA3E 707673 (Entrez Gene)
Chr3 XP_002803437 (RefSeq)
cattle SEMA3E 535644 (Entrez Gene)
Chr4 XP_003582119 (RefSeq)
dog SEMA3E 483387 (Entrez Gene)
Chr18 XP_005631079 (RefSeq)
chicken SEMA3E 374089 (Entrez Gene)
Chr1 O42237 (UniProt | EBI)
NM_204242 (RefSeq)
zebrafish sema3e 565658 (Entrez Gene)
Chr18 NP_001038549 (RefSeq)
NM_001045084 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory