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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4566

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human S100A1 HGNC:10486 (HGNC)
6271 (Entrez Gene)
176940 (OMIM)
Chr1 q21 Chr1:153628397-153632037 (+)
GRCh38
P23297 (UniProt | EBI)
NM_006271 (RefSeq)
mouse S100a1 MGI:1338917 (MGI)
20193 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 39.24 cM Chr3:90511034-90514392 (-)
GRCm38
OTTMUSG00000022107 (VEGA)
OTTMUSP00000024891 (VEGA)
OTTMUST00000052482 (VEGA)
rat S100a1 295214 (Entrez Gene)
Chr2 q34 P35467 (UniProt | EBI)
NM_001007636 (RefSeq)
chimpanzee S100A1 457325 (Entrez Gene)
Chr1 XP_001140144 (RefSeq)
rhesus macaque S100A1 715403 (Entrez Gene)
Chr1 XP_001111015 (RefSeq)
cattle S100A1 528735 (Entrez Gene)
Chr3 NP_001092512 (RefSeq)
NM_001099042 (RefSeq)
dog S100A1 480141 (Entrez Gene)
Chr7 XP_005622873 (RefSeq)
chicken S100A1 100858258 (Entrez Gene)
Chr25 NP_001289102 (RefSeq)
NM_001302173 (RefSeq)
western clawed frog LOC101734724 101734724 (Entrez Gene)
ChrUN XP_004920660 (RefSeq)
zebrafish s100a1 448856 (Entrez Gene)
Chr16 NP_001082820 (RefSeq)
NM_001089351 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory