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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
579

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CACNA2D1 HGNC:1399 (HGNC)
781 (Entrez Gene)
114204 (OMIM)
Chr7 q21-q22 Chr7:81946444-82443715 (-)
GRCh38
P54289 (UniProt | EBI)
NM_000722 (RefSeq)
mouse Cacna2d1 MGI:88295 (MGI)
12293 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 6.56 cM Chr5:15934691-16374511 (+)
GRCm38
12293 (NCBI Gene Model)
O08532 (UniProt | EBI)
NM_001110843 (RefSeq)
rat Cacna2d1 25399 (Entrez Gene)
Chr4 q11 P54290 (UniProt | EBI)
NM_012919 (RefSeq)
chimpanzee CACNA2D1 463504 (Entrez Gene)
Chr7 XP_001160279 (RefSeq)
rhesus macaque CACNA2D1 708215 (Entrez Gene)
Chr3 XP_002803438 (RefSeq)
cattle CACNA2D1 282608 (Entrez Gene)
Chr4 NP_001192916 (RefSeq)
NM_001205987 (RefSeq)
dog CACNA2D1 610342 (Entrez Gene)
Chr18 XP_005631077 (RefSeq)
chicken CACNA2D1 768444 (Entrez Gene)
Chr1 NP_001170793 (RefSeq)
NM_001177322 (RefSeq)
zebrafish cacna2d1a 561434 (Entrez Gene)
Chr4 NP_001038425 (RefSeq)
NM_001044960 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory