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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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mouse Clca3a1 MGI:1316732 (MGI)
12722 (Entrez Gene)
Gene Tree
Chr3 69.06 cM Chr3:144729677-144760977 (-)
OTTMUSG00000026564 (VEGA)
OTTMUSP00000032793 (VEGA)
OTTMUST00000065726 (VEGA)
Clca3a2 MGI:1931471 (MGI)
80797 (Entrez Gene)
Gene Tree
Chr3 69.12 cM Chr3:144796559-144819494 (-)
OTTMUSG00000026565 (VEGA)
OTTMUSP00000032794 (VEGA)
OTTMUST00000065727 (VEGA)
rat Clca2 362052 (Entrez Gene)
Chr2 q44 NP_001013220 (RefSeq)
NM_001013202 (RefSeq)
cattle CLCA3 281694 (Entrez Gene)
Chr3 NP_851361 (RefSeq)
NM_181018 (RefSeq)
LOC784768 784768 (Entrez Gene)
Chr3 P54281 (UniProt | EBI)
NM_001242583 (RefSeq)
dog LOC479964 479964 (Entrez Gene)
chicken CLCA1 424523 (Entrez Gene)
Chr8 XP_015146328 (RefSeq)
zebrafish clca1 334289 (Entrez Gene)
Chr15 NP_001292518 (RefSeq)
NM_001305589 (RefSeq)
frog, western clawed clca1 594875 (Entrez Gene)
Chr4 NP_001184129 (RefSeq)
NM_001197200 (RefSeq)
clca3p 100495107 (Entrez Gene)
Chr4 XP_017948636 (RefSeq)
LOC100158554 100158554 (Entrez Gene)
Chr4 XP_012817908 (RefSeq)
LOC100488301 100488301 (Entrez Gene)
Chr4 XP_012817910 (RefSeq)
LOC100490932 100490932 (Entrez Gene)
Chr4 XP_002934201 (RefSeq)
macaque, rhesus LOC715292 715292 (Entrez Gene)
Chr1 XP_014999853 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory