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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20517

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human KCNS1 HGNC:6300 (HGNC)
3787 (Entrez Gene)
602905 (OMIM)
Chr20 q12 Chr20:45092308-45101112 (-)
GRCh38
Q96KK3 (UniProt | EBI)
NM_002251 (RefSeq)
mouse Kcns1 MGI:1197019 (MGI)
16538 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 84.6 cM Chr2:164163619-164171113 (-)
GRCm38
OTTMUSG00000001173 (VEGA)
OTTMUSP00000001130 (VEGA)
OTTMUST00000002300 (VEGA)
rat Kcns1 117023 (Entrez Gene)
Chr3 q42 O88758 (UniProt | EBI)
NM_053954 (RefSeq)
chimpanzee KCNS1 469951 (Entrez Gene)
Chr20 A4K2N8 (UniProt | EBI)
NM_001135850 (RefSeq)
rhesus macaque KCNS1 711715 (Entrez Gene)
Chr10 A4K2T1 (UniProt | EBI)
NM_001168626 (RefSeq)
cattle KCNS1 521338 (Entrez Gene)
Chr13 NP_001192813 (RefSeq)
NM_001205884 (RefSeq)
dog KCNS1 485889 (Entrez Gene)
Chr24 XP_543013 (RefSeq)
chicken KCNS1 770173 (Entrez Gene)
Chr20 XP_001232667 (RefSeq)
western clawed frog kcns1 100492665 (Entrez Gene)
ChrUN XP_002938059 (RefSeq)
zebrafish si:dkey-43k4.5 100148290 (Entrez Gene)
Chr6 XP_001922193 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory