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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
21564

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PTPRO HGNC:9678 (HGNC)
5800 (Entrez Gene)
600579 (OMIM)
Chr12 p13.3-p13.2 Chr12:15322257-15598331 (+)
GRCh38
Nephrotic Syndrome, Type 6; NPHS6
Q16827 (UniProt | EBI)
NM_002848 (RefSeq)
mouse Ptpro MGI:1097152 (MGI)
19277 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 66.75 cM Chr6:137252299-137464629 (+)
GRCm38
ENSMUSG00000030223 (Ensembl Gene Model)
ENSMUSP00000076364 (Ensembl)
ENSMUST00000077115 (Ensembl)
rat Ptpro 50677 (Entrez Gene)
Chr4 q44 NP_059032 (RefSeq)
NM_017336 (RefSeq)
chimpanzee PTPRO 465314 (Entrez Gene)
Chr12 XP_003313570 (RefSeq)
cattle PTPRO 541043 (Entrez Gene)
Chr5 XP_614266 (RefSeq)
dog PTPRO 486664 (Entrez Gene)
Chr27 XP_543791 (RefSeq)
chicken PTPRO 373911 (Entrez Gene)
Chr1 NP_989453 (RefSeq)
NM_204122 (RefSeq)
zebrafish ptpro 407676 (Entrez Gene)
Chr19 NP_001077283 (RefSeq)
NM_001083814 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory