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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
20286

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SSTR4 HGNC:11333 (HGNC)
6754 (Entrez Gene)
182454 (OMIM)
Chr20 p11.2 Chr20:23035420-23036677 (+)
GRCh38
P31391 (UniProt | EBI)
NM_001052 (RefSeq)
mouse Sstr4 MGI:105372 (MGI)
20608 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 73.44 cM Chr2:148395344-148396767 (+)
GRCm38
OTTMUSG00000015711 (VEGA)
OTTMUSP00000016722 (VEGA)
OTTMUST00000037330 (VEGA)
rat Sstr4 25555 (Entrez Gene)
Chr3 q41 P30937 (UniProt | EBI)
NM_013036 (RefSeq)
chimpanzee SSTR4 469897 (Entrez Gene)
Chr20 XP_525282 (RefSeq)
rhesus macaque SSTR4 702017 (Entrez Gene)
Chr10 XP_001095303 (RefSeq)
chicken SSTR4 428547 (Entrez Gene)
Chr3 NP_001026689 (RefSeq)
NM_001031518 (RefSeq)
western clawed frog LOC100496787 100496787 (Entrez Gene)
ChrUN XP_004914786 (RefSeq)
zebrafish LOC557645 557645 (Entrez Gene)
Chr7 XP_005172275 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory