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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55680

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRKD1 HGNC:9407 (HGNC)
5587 (Entrez Gene)
605435 (OMIM)
Chr14 q11 Chr14:29576479-29927693 (-)
GRCh38
Q15139 (UniProt | EBI)
NM_002742 (RefSeq)
mouse Prkd1 MGI:99879 (MGI)
18760 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 21.78 cM Chr12:50341231-50649223 (-)
GRCm38
ENSMUSG00000002688 (Ensembl Gene Model)
ENSMUSP00000002765 (Ensembl)
ENSMUST00000002765 (Ensembl)
rat Prkd1 85421 (Entrez Gene)
Chr6 q22 Q9WTQ1 (UniProt | EBI)
NM_001276715 (RefSeq)
chimpanzee PRKD1 452834 (Entrez Gene)
Chr14 XP_001170806 (RefSeq)
rhesus macaque PRKD1 716937 (Entrez Gene)
Chr7 XP_001114639 (RefSeq)
cattle PRKD1 533270 (Entrez Gene)
Chr21 XP_612625 (RefSeq)
dog PRKD1 609091 (Entrez Gene)
Chr8 XP_005623342 (RefSeq)
chicken PRKD1 423302 (Entrez Gene)
Chr5 NP_001026372 (RefSeq)
NM_001031201 (RefSeq)
western clawed frog prkd1 100151704 (Entrez Gene)
ChrUN NP_001120884 (RefSeq)
NM_001127412 (RefSeq)
zebrafish prkd1 557123 (Entrez Gene)
Chr17 XP_005158873 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory