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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
37427

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SSTR2 HGNC:11331 (HGNC)
6752 (Entrez Gene)
182452 (OMIM)
Chr17 q24 Chr17:73165021-73171955 (+)
GRCh38
P30874 (UniProt | EBI)
NM_001050 (RefSeq)
mouse Sstr2 MGI:98328 (MGI)
20606 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 79.05 cM Chr11:113619342-113626028 (+)
GRCm38
OTTMUSG00000003400 (VEGA)
OTTMUSP00000065122 (VEGA)
OTTMUST00000007141 (VEGA)
rat Sstr2 54305 (Entrez Gene)
Chr10 q32.1 P30680 (UniProt | EBI)
NM_019348 (RefSeq)
chimpanzee SSTR2 454854 (Entrez Gene)
Chr17 NP_001233528 (RefSeq)
NM_001246599 (RefSeq)
rhesus macaque SSTR2 695526 (Entrez Gene)
Chr16 XP_001085574 (RefSeq)
cattle SSTR2 282083 (Entrez Gene)
Chr19 P34993 (UniProt | EBI)
NM_174467 (RefSeq)
dog SSTR2 403472 (Entrez Gene)
Chr9 Q49LX6 (UniProt | EBI)
NM_001031817 (RefSeq)
chicken SSTR2 395305 (Entrez Gene)
Chr18 NP_001025516 (RefSeq)
NM_001030345 (RefSeq)
western clawed frog sstr2 100496382 (Entrez Gene)
ChrUN XP_002935929 (RefSeq)
zebrafish LOC100333578 100333578 (Entrez Gene)
Chr12 XP_005170178 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory