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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
21035

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human KCND1 HGNC:6237 (HGNC)
3750 (Entrez Gene)
300281 (OMIM)
ChrX p11.23 ChrX:48961378-48971844 (-)
GRCh38
Q9NSA2 (UniProt | EBI)
NM_004979 (RefSeq)
mouse Kcnd1 MGI:96671 (MGI)
16506 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 3.53 cM ChrX:7822289-7838280 (+)
GRCm38
OTTMUSG00000017926 (VEGA)
OTTMUSP00000019475 (VEGA)
OTTMUST00000043332 (VEGA)
rat Kcnd1 116695 (Entrez Gene)
ChrX q13 NP_001099218 (RefSeq)
NM_001105748 (RefSeq)
chimpanzee KCND1 465624 (Entrez Gene)
ChrX XP_521053 (RefSeq)
rhesus macaque KCND1 711997 (Entrez Gene)
ChrX XP_001104621 (RefSeq)
cattle KCND1 518384 (Entrez Gene)
ChrX Q52PG9 (UniProt | EBI)
NM_001024553 (RefSeq)
dog KCND1 612548 (Entrez Gene)
ChrX XP_855372 (RefSeq)
western clawed frog LOC100488387 100488387 (Entrez Gene)
ChrUN XP_002943981 (RefSeq)
zebrafish kcnd1 100001681 (Entrez Gene)
Chr8 NP_001119942 (RefSeq)
NM_001126470 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory