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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
68134

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human KCNC1 HGNC:6233 (HGNC)
3746 (Entrez Gene)
176258 (OMIM)
Chr11 p15 Chr11:17735948-17783055 (+)
GRCh38
P48547 (UniProt | EBI)
NM_004976 (RefSeq)
mouse Kcnc1 MGI:96667 (MGI)
16502 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 30.1 cM Chr7:46396497-46438375 (+)
GRCm38
OTTMUSG00000034762 (VEGA)
OTTMUSP00000048127 (VEGA)
OTTMUST00000088338 (VEGA)
rat Kcnc1 25327 (Entrez Gene)
Chr1 q22 P25122 (UniProt | EBI)
NM_012856 (RefSeq)
chimpanzee KCNC1 466452 (Entrez Gene)
Chr11 XP_001172719 (RefSeq)
rhesus macaque KCNC1 696106 (Entrez Gene)
Chr14 NP_001180751 (RefSeq)
NM_001193822 (RefSeq)
cattle KCNC1 541459 (Entrez Gene)
Chr15 NP_001013623 (RefSeq)
NM_001013605 (RefSeq)
dog KCNC1 403705 (Entrez Gene)
Chr21 NP_001003113 (RefSeq)
NM_001003113 (RefSeq)
chicken KCNC1 423076 (Entrez Gene)
Chr5 XP_421008 (RefSeq)
zebrafish kcnc1a 565419 (Entrez Gene)
Chr7 NP_001122197 (RefSeq)
NM_001128725 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory