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Comparative GO Graph (mouse, human, rat)
Source
Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Synpo

Graphs for Molecular Function, Cellular Component, Biological Process generated Mon Apr 26 17:39:58 2021.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

Molecular Function


Cellular Component


Biological Process



Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Synpo
Category ID Classification term Gene Evidence Inferred from Organism Reference
Molecular FunctionGO:0003779actin bindingSynpoIDAMouseMGI:MGI:1097825|PMID:9314539
Molecular FunctionGO:0005515protein bindingSYNPOIPIUniProtKB:Q8IX03HumanPMID:18596123
Molecular FunctionGO:0005515protein bindingSYNPOIPIUniProtKB:P12814HumanPMID:26496610
Molecular FunctionGO:0005515protein bindingSYNPOIPIUniProtKB:P12814HumanPMID:30021884
Molecular FunctionGO:0005515protein bindingSYNPOIPIUniProtKB:Q96ES7HumanPMID:32296183
Molecular FunctionGO:0005515protein bindingSYNPOIPIUniProtKB:Q99459HumanPMID:32296183
Cellular ComponentGO:0015629actin cytoskeletonSYNPOIDAHumanGO_REF:0000054
Cellular ComponentGO:0015629actin cytoskeletonSynpoIDAMouseMGI:MGI:1097825|PMID:9314539
Cellular ComponentGO:0005829cytosolSYNPOIDAHumanPMID:30661770
Cellular ComponentGO:0098978glutamatergic synapseSynpoIDAMouseMGI:MGI:5607805|PMID:25164660
Cellular ComponentGO:0098978glutamatergic synapseSynpoIMPMouseMGI:MGI:2673780|PMID:12928494
Cellular ComponentGO:0098978glutamatergic synapseSynpoIMPMouseMGI:MGI:5607805|PMID:25164660
Cellular ComponentGO:0098978glutamatergic synapseSynpoIDARatPMID:10701442|RGD:13702235
Cellular ComponentGO:0098685Schaffer collateral - CA1 synapseSynpoIMPMouseMGI:MGI:2673780|PMID:12928494
Cellular ComponentGO:0097444spine apparatusSynpoIDAMouseMGI:MGI:2673780|PMID:12928494
Cellular ComponentGO:0097444spine apparatusSynpoIDARatPMID:10701442|RGD:13702235
Cellular ComponentGO:0001725stress fiberSynpoIDAMouseMGI:MGI:3577135|PMID:15841212
Biological ProcessGO:0098886modification of dendritic spineSYNPOIDAHumanPMID:25164660
Biological ProcessGO:0032233positive regulation of actin filament bundle assemblySynpoIDAMouseMGI:MGI:3577135|PMID:15841212
Biological ProcessGO:0099588positive regulation of postsynaptic cytosolic calcium concentrationSynpoIDAMouseMGI:MGI:5607805|PMID:25164660
Biological ProcessGO:0099588positive regulation of postsynaptic cytosolic calcium concentrationSynpoIMPMouseMGI:MGI:5607805|PMID:25164660
Biological ProcessGO:0099170postsynaptic modulation of chemical synaptic transmissionSynpoIMPMouseMGI:MGI:2673780|PMID:12928494
Biological ProcessGO:0048169regulation of long-term neuronal synaptic plasticitySynpoIMPMouseMGI:MGI:2673780|PMID:12928494
Biological ProcessGO:0051492regulation of stress fiber assemblySynpoIDAMouseMGI:MGI:3577135|PMID:15841212
Biological ProcessGO:1905355spine apparatus assemblySynpoIMPMouseMGI:MGI:2673780|PMID:12928494
Biological ProcessGO:0008542visual learningSynpoIMPMouseMGI:MGI:2673780|PMID:12928494

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment
  IDA Inferred from direct assay
  IEP Inferred from expression pattern
  IGI Inferred from genetic interaction
  IMP Inferred from mutant phenotype
  IPI Inferred from physical interaction
  HTP Inferred from High Throughput Experiment
  HDA Inferred from High Throughput Direct Assay
  HMP Inferred from High Throughput Mutant Phenotype
  HGI Inferred from High Throughput Genetic Interaction
  HEP Inferred from High Throughput Expression Pattern

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/23/2021
MGI 6.17
The Jackson Laboratory