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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
9898

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CLN6 HGNC:2077 (HGNC)
54982 (Entrez Gene)
606725 (OMIM)
Chr15 q23 Chr15:68206992-68229742 (-)
GRCh38
Ceroid Lipofuscinosis, Neuronal, 4a, Autosomal Recessive; CLN4A
Ceroid Lipofuscinosis, Neuronal, 6; CLN6
Q9NWW5 (UniProt | EBI)
NM_017882 (RefSeq)
mouse Cln6 MGI:2159324 (MGI)
76524 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 33.89 cM Chr9:62838785-62852006 (+)
GRCm38
Ceroid Lipofuscinosis, Neuronal, 6; CLN6
OTTMUSG00000033326 (VEGA)
OTTMUSP00000044963 (VEGA)
OTTMUST00000083630 (VEGA)
rat Cln6 315746 (Entrez Gene)
Chr8 q24 NP_001178723 (RefSeq)
NM_001191794 (RefSeq)
cattle CLN6 617615 (Entrez Gene)
Chr10 NP_001103454 (RefSeq)
NM_001109984 (RefSeq)
dog CLN6 497068 (Entrez Gene)
Chr30 Q5JZQ8 (UniProt | EBI)
NM_001011888 (RefSeq)
chicken CLN6 415558 (Entrez Gene)
Chr10 NP_001264557 (RefSeq)
NM_001277628 (RefSeq)
western clawed frog cln6 100145280 (Entrez Gene)
ChrUN NP_001120230 (RefSeq)
NM_001126758 (RefSeq)
zebrafish cln6a 449809 (Entrez Gene)
Chr7 NP_001005982 (RefSeq)
NM_001005982 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory