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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CLN6 HGNC:2077 (HGNC)
54982 (Entrez Gene)
606725 (OMIM)
CLN6 (MyGene.info)
HGNC homology
Chr15 q23 Chr15:68206992-68229742 (-)
neuronal ceroid lipofuscinosis 4A
neuronal ceroid lipofuscinosis 6
Q9NWW5 (UniProt | EBI)
NM_017882 (RefSeq)
mouse Cln6 MGI:2159324 (MGI)
76524 (Entrez Gene)
Gene Tree
HGNC homology
Chr9 33.89 cM Chr9:62838785-62852006 (+)
neuronal ceroid lipofuscinosis 6
OTTMUSG00000033326 (VEGA)
OTTMUSP00000044963 (VEGA)
OTTMUST00000083630 (VEGA)
rat Cln6 315746 (Entrez Gene)
Chr8 q24 NP_001178723 (RefSeq)
NM_001191794 (RefSeq)
cattle CLN6 617615 (Entrez Gene)
Chr10 NP_001103454 (RefSeq)
NM_001109984 (RefSeq)
dog CLN6 497068 (Entrez Gene)
Chr30 Q5JZQ8 (UniProt | EBI)
NM_001011888 (RefSeq)
chicken CLN6 415558 (Entrez Gene)
Chr10 NP_001264557 (RefSeq)
NM_001277628 (RefSeq)
zebrafish cln6a 449809 (Entrez Gene)
Chr7 NP_001005982 (RefSeq)
NM_001005982 (RefSeq)
frog, western clawed cln6 100145280 (Entrez Gene)
Chr3 NP_001120230 (RefSeq)
NM_001126758 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory