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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CLCN6 HGNC:2024 (HGNC)
1185 (Entrez Gene)
602726 (OMIM)
HGNC homology
Chr1 p36 Chr1:11806096-11843144 (+)
P51797 (UniProt | EBI)
NM_021737 (RefSeq)
mouse Clcn6 MGI:1347049 (MGI)
26372 (Entrez Gene)
Gene Tree
HGNC homology
Chr4 78.67 cM Chr4:148004259-148038821 (-)
Ceroid Lipofuscinosis, Neuronal, 3; CLN3
OTTMUSG00000010195 (VEGA)
OTTMUSP00000010834 (VEGA)
OTTMUST00000023694 (VEGA)
rat Clcn6 295586 (Entrez Gene)
Chr5 q36 NP_001099949 (RefSeq)
NM_001106479 (RefSeq)
chimpanzee CLCN6 457955 (Entrez Gene)
Chr1 XP_001140805 (RefSeq)
rhesus macaque CLCN6 714793 (Entrez Gene)
Chr1 NP_001244705 (RefSeq)
NM_001257776 (RefSeq)
cattle CLCN6 520210 (Entrez Gene)
Chr16 NP_001192799 (RefSeq)
NM_001205870 (RefSeq)
dog CLCN6 478229 (Entrez Gene)
Chr2 XP_535404 (RefSeq)
chicken CLCN6 419488 (Entrez Gene)
Chr21 NP_001272908 (RefSeq)
NM_001285979 (RefSeq)
western clawed frog clcn6 100496474 (Entrez Gene)
ChrUN XP_002937575 (RefSeq)
zebrafish clcn6 568122 (Entrez Gene)
Chr8 XP_009302552 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.01
The Jackson Laboratory