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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
9830

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CDKAL1 HGNC:21050 (HGNC)
54901 (Entrez Gene)
611259 (OMIM)
Chr6 p22.3 Chr6:20534457-21232404 (+)
GRCh38
Diabetes Mellitus, Noninsulin-Dependent; NIDDM
Q5VV42 (UniProt | EBI)
NM_017774 (RefSeq)
mouse Cdkal1 MGI:1921765 (MGI)
68916 (Entrez Gene)
Gene Tree
VISTA-Point
Chr13 12.93 cM Chr13:29191746-29855674 (-)
GRCm38
Diabetes Mellitus, Noninsulin-Dependent; NIDDM
OTTMUSG00000000663 (VEGA)
OTTMUSP00000000607 (VEGA)
OTTMUST00000001282 (VEGA)
chimpanzee CDKAL1 747778 (Entrez Gene)
Chr6 XP_001171194 (RefSeq)
rhesus macaque CDKAL1 706409 (Entrez Gene)
Chr4 XP_001098819 (RefSeq)
cattle CDKAL1 530159 (Entrez Gene)
Chr23 NP_001179620 (RefSeq)
NM_001192691 (RefSeq)
dog CDKAL1 488240 (Entrez Gene)
Chr35 NP_001271376 (RefSeq)
NM_001284447 (RefSeq)
chicken CDKAL1 420823 (Entrez Gene)
Chr2 XP_418914 (RefSeq)
zebrafish cdkal1 393600 (Entrez Gene)
Chr16 Q6PG34 (UniProt | EBI)
NM_200627 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory