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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
9824

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CASZ1 HGNC:26002 (HGNC)
54897 (Entrez Gene)
609895 (OMIM)
CASZ1 (MyGene.info)
HGNC homology
Chr1 p36.22 Chr1:10636602-10796676 (-)
GRCh38.p7
Q86V15 (UniProt | EBI)
NM_001079843 (RefSeq)
mouse Casz1 MGI:1196251 (MGI)
69743 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr4 78.87 cM Chr4:148804429-148954889 (+)
GRCm38
chromosome 1p36 deletion syndrome
ENSMUSG00000028977 (Ensembl Gene Model)
ENSMUSP00000112978 (Ensembl)
ENSMUST00000122222 (Ensembl)
rat Casz1 313713 (Entrez Gene)
Chr5 q36 XP_006225686 (RefSeq)
chimpanzee CASZ1 457931 (Entrez Gene)
Chr1 XP_024212055 (RefSeq)
cattle CASZ1 536765 (Entrez Gene)
Chr16 XP_024832494 (RefSeq)
NM_001078010 (RefSeq)
dog CASZ1 487448 (Entrez Gene)
Chr2 XP_022270351 (RefSeq)
chicken CASZ1 419452 (Entrez Gene)
Chr21 XP_004947523 (RefSeq)
zebrafish casz1 559053 (Entrez Gene)
Chr23 XP_005162343 (RefSeq)
frog, western clawed casz1 100127676 (Entrez Gene)
Chr7 XP_017951323 (RefSeq)
NM_001113014 (RefSeq)
macaque, rhesus CASZ1 722677 (Entrez Gene)
Chr1 XP_028695739 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory