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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATR HGNC:882 (HGNC)
545 (Entrez Gene)
601215 (OMIM)
HGNC homology
Chr3 q23 Chr3:142449235-142578826 (-)
Seckel syndrome 1
Q13535 (UniProt | EBI)
NM_001184 (RefSeq)
mouse Atr MGI:108028 (MGI)
245000 (Entrez Gene)
Gene Tree
HGNC homology
Chr9 50.27 cM Chr9:95857597-95951644 (+)
Seckel syndrome
OTTMUSG00000047295 (VEGA)
OTTMUSP00000067136 (VEGA)
OTTMUST00000122282 (VEGA)
rat Atr 685055 (Entrez Gene)
Chr8 q31 XP_006243662 (RefSeq)
chimpanzee ATR 460745 (Entrez Gene)
Chr3 XP_016797581 (RefSeq)
cattle ATR 504869 (Entrez Gene)
Chr1 XP_002685103 (RefSeq)
dog ATR 100856315 (Entrez Gene)
Chr23 XP_013962171 (RefSeq)
chicken ATR 424777 (Entrez Gene)
Chr9 XP_015132446 (RefSeq)
zebrafish atr 567770 (Entrez Gene)
Chr2 XP_696163 (RefSeq)
frog, western clawed atr 100495593 (Entrez Gene)
Chr5 XP_012818766 (RefSeq)
macaque, rhesus ATR 714443 (Entrez Gene)
Chr2 XP_014987478 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory