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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATR HGNC:882 (HGNC)
545 (Entrez Gene)
601215 (OMIM)
HGNC homology
Chr3 q23 Chr3:142449235-142578826 (-)
Cutaneous Telangiectasia and Cancer Syndrome, Familial; FCTCS
Seckel Syndrome 1; SCKL1
Q13535 (UniProt | EBI)
NM_001184 (RefSeq)
mouse Atr MGI:108028 (MGI)
245000 (Entrez Gene)
Gene Tree
Chr9 50.27 cM Chr9:95857597-95951644 (+)
Seckel Syndrome 1; SCKL1
OTTMUSG00000047295 (VEGA)
OTTMUSP00000067136 (VEGA)
OTTMUST00000122282 (VEGA)
rat Atr 685055 (Entrez Gene)
Chr8 q31 XP_003750609 (RefSeq)
chimpanzee ATR 460745 (Entrez Gene)
Chr3 XP_009444881 (RefSeq)
rhesus macaque ATR 714443 (Entrez Gene)
Chr2 XP_014987477 (RefSeq)
cattle ATR 504869 (Entrez Gene)
Chr1 XP_010799873 (RefSeq)
dog ATR 100856315 (Entrez Gene)
Chr23 XP_013962169 (RefSeq)
chicken ATR 424777 (Entrez Gene)
Chr9 XP_015132446 (RefSeq)
western clawed frog atr 100495593 (Entrez Gene)
ChrUN XP_012818766 (RefSeq)
zebrafish atr 567770 (Entrez Gene)
Chr2 XP_009296719 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.03
The Jackson Laboratory