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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
9533

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PPHLN1 HGNC:19369 (HGNC)
51535 (Entrez Gene)
608150 (OMIM)
PPHLN1 (MyGene.info)
HGNC homology
Chr12 q12 Chr12:42326126-42448621 (+)
GRCh38.p7
Q8NEY8 (UniProt | EBI)
NM_201515 (RefSeq)
mouse Pphln1 MGI:1917029 (MGI)
223828 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr15 47.55 cM Chr15:93398350-93491510 (+)
GRCm38
ENSMUSG00000036167 (Ensembl Gene Model)
ENSMUSP00000042762 (Ensembl)
ENSMUST00000049122 (Ensembl)
rat Pphln1 366975 (Entrez Gene)
Chr7 q35 NP_001102462 (RefSeq)
NM_001108992 (RefSeq)
chimpanzee PPHLN1 451837 (Entrez Gene)
Chr12 XP_009423860 (RefSeq)
dog PPHLN1 477639 (Entrez Gene)
Chr27 XP_013963992 (RefSeq)
chicken PPHLN1 417792 (Entrez Gene)
Chr1 NP_001292186 (RefSeq)
NM_001305257 (RefSeq)
frog, western clawed pphln1 394576 (Entrez Gene)
Chr3 NP_988979 (RefSeq)
NM_203648 (RefSeq)
macaque, rhesus PPHLN1 701728 (Entrez Gene)
Chr11 XP_015006980 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/05/2019
MGI 6.13
The Jackson Laboratory