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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
9485

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human IRX4 HGNC:6129 (HGNC)
50805 (Entrez Gene)
606199 (OMIM)
IRX4 (MyGene.info)
HGNC homology
Chr5 p15.33 Chr5:1877427-1887179 (-)
GRCh38.p7
P78413 (UniProt | EBI)
NM_001278632 (RefSeq)
mouse Irx4 MGI:1355275 (MGI)
50916 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr13 39.64 cM Chr13:73260479-73269608 (+)
GRCm38
ENSMUSG00000021604 (Ensembl Gene Model)
ENSMUSP00000134738 (Ensembl)
ENSMUST00000176684 (Ensembl)
rat Irx4 306655 (Entrez Gene)
Chr1 NP_001100800 (RefSeq)
NM_001107330 (RefSeq)
cattle IRX4 614900 (Entrez Gene)
Chr20 NP_001091936 (RefSeq)
NM_001098466 (RefSeq)
chicken IRX4 373974 (Entrez Gene)
Chr2 Q9YGS0 (UniProt | EBI)
NM_001001744 (RefSeq)
zebrafish irx4a 402999 (Entrez Gene)
Chr16 NP_991261 (RefSeq)
NM_205698 (RefSeq)
frog, western clawed irx4 100038068 (Entrez Gene)
Chr6 Q688D0 (UniProt | EBI)
NM_001276692 (RefSeq)
macaque, rhesus IRX4 710675 (Entrez Gene)
Chr6 XP_014995195 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
03/24/2020
MGI 6.15
The Jackson Laboratory