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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
9471

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human UPB1 HGNC:16297 (HGNC)
51733 (Entrez Gene)
606673 (OMIM)
Chr22 q11.2 Chr22:24467238-24526585 (+)
GRCh38
Beta-Ureidopropionase Deficiency
Q9UBR1 (UniProt | EBI)
NM_016327 (RefSeq)
mouse Upb1 MGI:2143535 (MGI)
103149 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 38.53 cM Chr10:75406911-75441679 (+)
GRCm38
OTTMUSG00000031799 (VEGA)
OTTMUSP00000041948 (VEGA)
OTTMUST00000078814 (VEGA)
rat Upb1 116593 (Entrez Gene)
Chr20 p12 Q03248 (UniProt | EBI)
NM_053845 (RefSeq)
chimpanzee UPB1 747532 (Entrez Gene)
Chr22 XP_001170826 (RefSeq)
rhesus macaque UPB1 707752 (Entrez Gene)
Chr10 XP_001095304 (RefSeq)
cattle UPB1 504557 (Entrez Gene)
Chr17 NP_001094520 (RefSeq)
NM_001101050 (RefSeq)
dog UPB1 486398 (Entrez Gene)
Chr26 XP_543524 (RefSeq)
chicken UPB1 416949 (Entrez Gene)
Chr15 XP_415242 (RefSeq)
western clawed frog upb1 100145317 (Entrez Gene)
ChrUN NP_001120264 (RefSeq)
NM_001126792 (RefSeq)
zebrafish upb1 322660 (Entrez Gene)
Chr8 NP_955910 (RefSeq)
NM_199616 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory