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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
9423

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PDGFC HGNC:8801 (HGNC)
56034 (Entrez Gene)
608452 (OMIM)
Chr4 q32 Chr4:156761611-156971394 (-)
GRCh38
Q9NRA1 (UniProt | EBI)
NM_016205 (RefSeq)
mouse Pdgfc MGI:1859631 (MGI)
54635 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 35.73 cM Chr3:81036416-81214040 (+)
GRCm38
OTTMUSG00000028878 (VEGA)
OTTMUSP00000036670 (VEGA)
OTTMUST00000071532 (VEGA)
rat Pdgfc 79429 (Entrez Gene)
Chr2 q33 Q9EQX6 (UniProt | EBI)
NM_031317 (RefSeq)
chimpanzee PDGFC 736477 (Entrez Gene)
Chr4 XP_001140766 (RefSeq)
rhesus macaque PDGFC 700236 (Entrez Gene)
Chr5 XP_001093265 (RefSeq)
cattle PDGFC 613787 (Entrez Gene)
Chr17 XP_869992 (RefSeq)
dog PDGFC 482666 (Entrez Gene)
Chr15 XP_539783 (RefSeq)
chicken PDGFC 395469 (Entrez Gene)
Chr4 Q9I946 (UniProt | EBI)
NM_204721 (RefSeq)
zebrafish LOC560564 560564 (Entrez Gene)
Chr14 XP_689054 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory