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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATL1 HGNC:11231 (HGNC)
51062 (Entrez Gene)
606439 (OMIM)
Atlastin (MyGene.info)
HGNC homology
Chr14 q22.1 Chr14:50533082-50633068 (+)
hereditary sensory neuropathy type ID
hereditary spastic paraplegia 3A
Q8WXF7 (UniProt | EBI)
NM_015915 (RefSeq)
mouse Atl1 MGI:1921241 (MGI)
73991 (Entrez Gene)
Gene Tree
HGNC homology
Chr12 28.94 cM Chr12:69893105-69964085 (+)
73991 (NCBI Gene Model)
Q8BH66 (UniProt | EBI)
NM_178628 (RefSeq)
rat Atl1 362750 (Entrez Gene)
Chr6 q24 Q6PST4 (UniProt | EBI)
NM_001009831 (RefSeq)
chimpanzee ATL1 467452 (Entrez Gene)
Chr14 XP_016781541 (RefSeq)
cattle ATL1 535424 (Entrez Gene)
Chr10 Q58D72 (UniProt | EBI)
NM_001034631 (RefSeq)
dog ATL1 480318 (Entrez Gene)
Chr8 XP_851462 (RefSeq)
chicken ATL1 423577 (Entrez Gene)
Chr5 XP_015132233 (RefSeq)
zebrafish atl1 571909 (Entrez Gene)
Chr13 NP_001139172 (RefSeq)
NM_001145700 (RefSeq)
frog, western clawed atl1 779669 (Entrez Gene)
Chr8 NP_001072222 (RefSeq)
NM_001078754 (RefSeq)
macaque, rhesus ATL1 706313 (Entrez Gene)
Chr7 NP_001244422 (RefSeq)
NM_001257493 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory