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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
93

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human EPB42 HGNC:3381 (HGNC)
2038 (Entrez Gene)
177070 (OMIM)
Chr15 q15-q21 Chr15:43197227-43221125 (-)
GRCh38
Spherocytosis, Type 5; SPH5
P16452 (UniProt | EBI)
NM_000119 (RefSeq)
mouse Epb4.2 MGI:95402 (MGI)
13828 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 60.37 cM Chr2:121017891-121037072 (-)
GRCm38
Spherocytosis, Type 1; SPH1
OTTMUSG00000015964 (VEGA)
OTTMUSP00000017032 (VEGA)
OTTMUST00000037960 (VEGA)
rat Epb42 362202 (Entrez Gene)
Chr3 q35 NP_001102060 (RefSeq)
NM_001108590 (RefSeq)
chimpanzee EPB42 453374 (Entrez Gene)
Chr15 XP_001156126 (RefSeq)
rhesus macaque LOC709427 709427 (Entrez Gene)
Chr7 XP_002808491 (RefSeq)
cattle EPB42 281754 (Entrez Gene)
Chr10 O46510 (UniProt | EBI)
NM_174312 (RefSeq)
dog EPB42 608932 (Entrez Gene)
Chr30 XP_851181 (RefSeq)
chicken EPB42 419216 (Entrez Gene)
Chr20 XP_417393 (RefSeq)
western clawed frog epb42 100487946 (Entrez Gene)
ChrUN XP_002935587 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory