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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
9215

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LRIT1 HGNC:23404 (HGNC)
26103 (Entrez Gene)
616103 (OMIM)
HGNC homology
Chr10 q23.1 Chr10:84231520-84241461 (-)
GRCh38.p7
Q9P2V4 (UniProt | EBI)
NM_015613 (RefSeq)
mouse Lrit1 MGI:2385320 (MGI)
239037 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr14 21.29 cM Chr14:37054830-37064946 (+)
GRCm38
ENSMUSG00000041044 (Ensembl Gene Model)
ENSMUSP00000113964 (Ensembl)
ENSMUST00000120052 (Ensembl)
rat Lrit1 246214 (Entrez Gene)
Chr16 p14 Q9JMH2 (UniProt | EBI)
NM_139331 (RefSeq)
chimpanzee LRIT1 466131 (Entrez Gene)
Chr10 XP_521533 (RefSeq)
cattle LRIT1 538858 (Entrez Gene)
Chr28 NP_001179044 (RefSeq)
NM_001192115 (RefSeq)
chicken LRIT1 428935 (Entrez Gene)
Chr6 XP_025007687 (RefSeq)
zebrafish lrit1a 553943 (Entrez Gene)
Chr13 NP_001018174 (RefSeq)
NM_001018164 (RefSeq)
lrit1b 553432 (Entrez Gene)
Chr12 NP_001036218 (RefSeq)
NM_001042753 (RefSeq)
frog, western clawed lrit1 100497318 (Entrez Gene)
Chr7 XP_002933950 (RefSeq)
macaque, rhesus LRIT1 698385 (Entrez Gene)
Chr9 XP_001086301 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/07/2020
MGI 6.14
The Jackson Laboratory