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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
9

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SGCA HGNC:10805 (HGNC)
6442 (Entrez Gene)
600119 (OMIM)
Chr17 q21 Chr17:50165879-50175932 (+)
GRCh38
Muscular Dystrophy, Limb-Girdle, Type 2D; LGMD2D
Q16586 (UniProt | EBI)
NM_000023 (RefSeq)
mouse Sgca MGI:894698 (MGI)
20391 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 59.01 cM Chr11:94962791-94976327 (-)
GRCm38
Muscular Dystrophy, Limb-Girdle, Type 2D; LGMD2D
OTTMUSG00000001503 (VEGA)
OTTMUSP00000001460 (VEGA)
OTTMUST00000002975 (VEGA)
rat Sgca 303468 (Entrez Gene)
Chr10 q31 NP_001100509 (RefSeq)
NM_001107039 (RefSeq)
chimpanzee SGCA 468403 (Entrez Gene)
Chr17 XP_523792 (RefSeq)
rhesus macaque SGCA 704493 (Entrez Gene)
Chr16 XP_001092850 (RefSeq)
cattle SGCA 541308 (Entrez Gene)
Chr19 NP_001013420 (RefSeq)
NM_001013402 (RefSeq)
dog SGCA 609265 (Entrez Gene)
Chr9 XP_005624692 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory