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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SGCA HGNC:10805 (HGNC)
6442 (Entrez Gene)
600119 (OMIM)
SGCA (MyGene.info)
HGNC homology
Chr17 q21.33 Chr17:50165517-50175932 (+)
autosomal recessive limb-girdle muscular dystrophy type 2D
Q16586 (UniProt | EBI)
NM_000023 (RefSeq)
mouse Sgca MGI:894698 (MGI)
20391 (Entrez Gene)
Gene Tree
HGNC homology
Chr11 59.01 cM Chr11:94962791-94976327 (-)
autosomal recessive limb-girdle muscular dystrophy type 2D
ENSMUSG00000001508 (Ensembl Gene Model)
ENSMUSP00000099451 (Ensembl)
ENSMUST00000103162 (Ensembl)
rat Sgca 303468 (Entrez Gene)
Chr10 q26 NP_001100509 (RefSeq)
NM_001107039 (RefSeq)
chimpanzee SGCA 468403 (Entrez Gene)
Chr17 XP_016787987 (RefSeq)
cattle SGCA 541308 (Entrez Gene)
Chr19 NP_001013420 (RefSeq)
NM_001013402 (RefSeq)
dog SGCA 609265 (Entrez Gene)
Chr9 XP_005624693 (RefSeq)
frog, western clawed sgca 100488410 (Entrez Gene)
Chr10 XP_002935590 (RefSeq)
macaque, rhesus SGCA 704493 (Entrez Gene)
Chr16 XP_001092850 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.16
The Jackson Laboratory