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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
897

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human APBA1 HGNC:578 (HGNC)
320 (Entrez Gene)
602414 (OMIM)
APBA1 (MyGene.info)
HGNC homology
Chr9 q21.12 Chr9:69427532-69673012 (-)
GRCh38.p7
Q02410 (UniProt | EBI)
NM_001163 (RefSeq)
mouse Apba1 MGI:1860297 (MGI)
319924 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr19 18.45 cM Chr19:23758887-23949596 (+)
GRCm38
ENSMUSG00000024897 (Ensembl Gene Model)
ENSMUSP00000025830 (Ensembl)
ENSMUST00000025830 (Ensembl)
rat Apba1 83589 (Entrez Gene)
Chr1 q51 O35430 (UniProt | EBI)
NM_031779 (RefSeq)
chimpanzee APBA1 472947 (Entrez Gene)
Chr9 XP_009454976 (RefSeq)
cattle APBA1 515571 (Entrez Gene)
Chr8 NP_001192743 (RefSeq)
NM_001205814 (RefSeq)
dog APBA1 100686233 (Entrez Gene)
Chr1 XP_022277111 (RefSeq)
chicken APBA1 427246 (Entrez Gene)
ChrZ XP_004949208 (RefSeq)
zebrafish apba1a 100003938 (Entrez Gene)
Chr5 XP_021332305 (RefSeq)
frog, western clawed apba1 100485825 (Entrez Gene)
Chr1 XP_004910832 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory