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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
8950

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CHSY1 HGNC:17198 (HGNC)
22856 (Entrez Gene)
608183 (OMIM)
Chr15 q26.3 Chr15:101175723-101251932 (-)
GRCh38
Temtamy Preaxial Brachydactyly Syndrome; TPBS
Q86X52 (UniProt | EBI)
NM_014918 (RefSeq)
mouse Chsy1 MGI:2681120 (MGI)
269941 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 35.5 cM Chr7:66109515-66173789 (+)
GRCm38
OTTMUSG00000029829 (VEGA)
OTTMUSP00000038400 (VEGA)
OTTMUST00000074032 (VEGA)
rat Chsy1 292999 (Entrez Gene)
Chr1 q22 NP_001099738 (RefSeq)
NM_001106268 (RefSeq)
chimpanzee CHSY1 467777 (Entrez Gene)
Chr15 XP_523172 (RefSeq)
rhesus macaque CHSY1 694481 (Entrez Gene)
Chr7 XP_001084554 (RefSeq)
cattle CHSY1 281690 (Entrez Gene)
Chr21 NP_001178086 (RefSeq)
NM_001191157 (RefSeq)
dog CHSY1 488704 (Entrez Gene)
Chr3 XP_545821 (RefSeq)
chicken CHSY1 415521 (Entrez Gene)
Chr10 XP_413889 (RefSeq)
western clawed frog chsy1 100036707 (Entrez Gene)
ChrUN NP_001090724 (RefSeq)
NM_001097255 (RefSeq)
zebrafish chsy1 324407 (Entrez Gene)
Chr7 NP_997843 (RefSeq)
NM_212678 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory