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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
88442

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ITCH HGNC:13890 (HGNC)
83737 (Entrez Gene)
606409 (OMIM)
Chr20 q11.22 Chr20:34363235-34515451 (+)
GRCh38
Autoimmune Disease, Syndromic Multisystem
Q96J02 (UniProt | EBI)
NM_031483 (RefSeq)
mouse Itch MGI:1202301 (MGI)
16396 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 76.94 cM Chr2:155133509-155226855 (+)
GRCm38
OTTMUSG00000016008 (VEGA)
OTTMUSP00000017091 (VEGA)
OTTMUST00000038117 (VEGA)
rat Itch 311567 (Entrez Gene)
Chr3 q42 NP_001005887 (RefSeq)
NM_001005887 (RefSeq)
rhesus macaque LOC707640 707640 (Entrez Gene)
Chr10 XP_002808005 (RefSeq)
cattle ITCH 508431 (Entrez Gene)
Chr13 NP_001075897 (RefSeq)
NM_001082428 (RefSeq)
dog ITCH 477199 (Entrez Gene)
Chr24 XP_851460 (RefSeq)
chicken ITCH 419145 (Entrez Gene)
Chr20 XP_417330 (RefSeq)
zebrafish itcha 100331274 (Entrez Gene)
Chr6 NP_001274024 (RefSeq)
NM_001287095 (RefSeq)
LOC100330031 100330031 (Entrez Gene)
Chr23 XP_003201702 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory