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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
8838

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SNX17 HGNC:14979 (HGNC)
9784 (Entrez Gene)
605963 (OMIM)
SNX17 (MyGene.info)
HGNC homology
Chr2 p23.3 Chr2:27370496-27377533 (+)
GRCh38.p7
Q15036 (UniProt | EBI)
NM_001267061 (RefSeq)
mouse Snx17 MGI:2387801 (MGI)
266781 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr5 17.26 cM Chr5:31193304-31198900 (+)
GRCm38
266781 (NCBI Gene Model)
Q8BVL3 (UniProt | EBI)
NM_153680 (RefSeq)
rat Snx17 298836 (Entrez Gene)
Chr6 q14 Q6AYS6 (UniProt | EBI)
NM_001011981 (RefSeq)
chimpanzee SNX17 459100 (Entrez Gene)
Chr2A XP_515357 (RefSeq)
cattle SNX17 529972 (Entrez Gene)
Chr11 Q5EA77 (UniProt | EBI)
NM_001015638 (RefSeq)
dog SNX17 483011 (Entrez Gene)
Chr17 XP_540126 (RefSeq)
chicken SNX17 421990 (Entrez Gene)
Chr3 XP_015140501 (RefSeq)
zebrafish snx17 568263 (Entrez Gene)
Chr20 Q5RID7 (UniProt | EBI)
NM_001045157 (RefSeq)
frog, western clawed snx17 407905 (Entrez Gene)
ChrUN NP_998873 (RefSeq)
NM_213708 (RefSeq)
macaque, rhesus SNX17 701614 (Entrez Gene)
Chr13 NP_001252904 (RefSeq)
NM_001265975 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory