About   Help   FAQ
Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
8743

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human VSX1 HGNC:12723 (HGNC)
30813 (Entrez Gene)
Chr20 p11.21 Chr20:25070885-25082379 (-)
GRCh38
Corneal Dystrophy, Posterior Polymorphous, 1; PPCD1
Craniofacial Anomalies and Anterior Segment Dysgenesis Syndrome; CAASDS
Keratoconus 1; KTCN1
Q9NZR4 (UniProt | EBI)
NM_014588 (RefSeq)
mouse Vsx1 MGI:1890816 (MGI)
114889 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 74.74 cM Chr2:150680702-150689360 (-)
GRCm38
OTTMUSG00000015757 (VEGA)
OTTMUSP00000016771 (VEGA)
OTTMUST00000037425 (VEGA)
rat Vsx1 689704 (Entrez Gene)
Chr3 q41 NP_001103016 (RefSeq)
NM_001109546 (RefSeq)
chimpanzee VSX1 741063 (Entrez Gene)
Chr20 XP_001149985 (RefSeq)
rhesus macaque LOC715973 715973 (Entrez Gene)
Chr10 XP_002798304 (RefSeq)
dog VSX1 608128 (Entrez Gene)
Chr23 XP_850138 (RefSeq)
chicken VSX1 395537 (Entrez Gene)
Chr3 Q9IAL2 (UniProt | EBI)
NM_204769 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/09/2014
MGI 5.19
The Jackson Laboratory