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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
8683

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AFF4 HGNC:17869 (HGNC)
27125 (Entrez Gene)
604417 (OMIM)
HGNC homology
Chr5 q31.1 Chr5:132875379-132963662 (-)
GRCh38.p7
Q9UHB7 (UniProt | EBI)
NM_014423 (RefSeq)
mouse Aff4 MGI:2136171 (MGI)
93736 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 31.93 cM Chr11:53350833-53421830 (+)
GRCm38
ENSMUSG00000049470 (Ensembl Gene Model)
ENSMUSP00000051479 (Ensembl)
ENSMUST00000060945 (Ensembl)
rat Aff4 303132 (Entrez Gene)
Chr10 q22 NP_001100471 (RefSeq)
NM_001107001 (RefSeq)
chimpanzee AFF4 462058 (Entrez Gene)
Chr5
cattle AFF4 541306 (Entrez Gene)
Chr7 NP_001178058 (RefSeq)
NM_001191129 (RefSeq)
dog AFF4 474678 (Entrez Gene)
Chr11 XP_005626586 (RefSeq)
chicken AFF4 416337 (Entrez Gene)
Chr13 XP_004945090 (RefSeq)
zebrafish aff4 556421 (Entrez Gene)
Chr21 XP_684327 (RefSeq)
frog, western clawed aff4 100485382 (Entrez Gene)
Chr3 XP_002935317 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/05/2019
MGI 6.14
The Jackson Laboratory