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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
8624

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SEC11C HGNC:23400 (HGNC)
90701 (Entrez Gene)
HGNC homology
Chr18 q21.32 Chr18:59139857-59158837 (+)
GRCh38.p7
Q9BY50 (UniProt | EBI)
NM_033280 (RefSeq)
mouse Sec11c MGI:1913536 (MGI)
66286 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr18 38.98 cM Chr18:65800549-65817665 (+)
GRCm38
OTTMUSG00000028234 (VEGA)
OTTMUSP00000035591 (VEGA)
OTTMUST00000069952 (VEGA)
rat Sec11c 266758 (Entrez Gene)
Chr18 q12.1 Q9WTR7 (UniProt | EBI)
NM_153628 (RefSeq)
cattle SEC11C 504842 (Entrez Gene)
Chr24 NP_001068643 (RefSeq)
NM_001075175 (RefSeq)
dog SEC11C 404003 (Entrez Gene)
Chr1 P13679 (UniProt | EBI)
NM_001003312 (RefSeq)
chicken SEC11C 426850 (Entrez Gene)
ChrZ XP_424458 (RefSeq)
frog, western clawed sec11c 448712 (Entrez Gene)
Chr1 NP_001005129 (RefSeq)
NM_001005129 (RefSeq)
macaque, rhesus SEC11C 696739 (Entrez Gene)
Chr18 XP_001086489 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/31/2018
MGI 6.12
The Jackson Laboratory