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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
8604

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SYCP2 HGNC:11490 (HGNC)
10388 (Entrez Gene)
604105 (OMIM)
HGNC homology
Chr20 q13.33 Chr20:59863277-59933700 (-)
GRCh38.p7
Q9BX26 (UniProt | EBI)
NM_014258 (RefSeq)
mouse Sycp2 MGI:1933281 (MGI)
320558 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr2 99.81 cM Chr2:178345293-178407685 (-)
GRCm38
ENSMUSG00000060445 (Ensembl Gene Model)
ENSMUSP00000079909 (Ensembl)
ENSMUST00000081134 (Ensembl)
rat Sycp2 83820 (Entrez Gene)
Chr3 q43 O70608 (UniProt | EBI)
NM_130735 (RefSeq)
chimpanzee SYCP2 458373 (Entrez Gene)
Chr20 XP_016793692 (RefSeq)
cattle SYCP2 784000 (Entrez Gene)
Chr13 XP_024856918 (RefSeq)
dog SYCP2 477278 (Entrez Gene)
Chr24 XP_022264577 (RefSeq)
chicken SYCP2 419219 (Entrez Gene)
Chr20 XP_015152157 (RefSeq)
frog, western clawed sycp2 779792 (Entrez Gene)
Chr10 XP_012809810 (RefSeq)
NM_001078871 (RefSeq)
macaque, rhesus SYCP2 100423232 (Entrez Gene)
Chr10 XP_028684378 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/12/2019
MGI 6.14
The Jackson Laboratory