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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RXYLT1 HGNC:13530 (HGNC)
10329 (Entrez Gene)
605862 (OMIM)
HGNC homology
Chr12 q14.2 Chr12:63779803-63809558 (+)
muscular dystrophy-dystroglycanopathy
Q9Y2B1 (UniProt | EBI)
NM_001278237 (RefSeq)
mouse Tmem5 MGI:2384919 (MGI)
216395 (Entrez Gene)
Gene Tree
HGNC homology
Chr10 70.25 cM Chr10:122078114-122097371 (-)
OTTMUSG00000027721 (VEGA)
OTTMUSP00000034721 (VEGA)
OTTMUST00000068598 (VEGA)
rat Rxylt1 299841 (Entrez Gene)
Chr7 q22 NP_001019930 (RefSeq)
NM_001024759 (RefSeq)
chimpanzee RXYLT1 452041 (Entrez Gene)
Chr12 XP_009423262 (RefSeq)
cattle RXYLT1 515147 (Entrez Gene)
Chr5 NP_001033203 (RefSeq)
NM_001038114 (RefSeq)
chicken TMEM5 417820 (Entrez Gene)
Chr1 NP_001186486 (RefSeq)
NM_001199557 (RefSeq)
zebrafish rxylt1 557187 (Entrez Gene)
Chr18 Q08CD5 (UniProt | EBI)
NM_001075112 (RefSeq)
frog, western clawed rxylt1 100145540 (Entrez Gene)
Chr3 NP_001120448 (RefSeq)
NM_001126976 (RefSeq)
macaque, rhesus RXYLT1 717102 (Entrez Gene)
Chr11 XP_015007687 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory